Publications

Phase portraits and the bifurcation set for the three-vortex interaction system
Atul Anurag (अतुल अनुराग) and Roy Goodman. Communications in Nonlinear Science and Numerical Simulation, 2026.
We use Jacobi coordinates and a momentum map/Lie-Poisson reduction to derive a system of equations for the three-vortex problem with no coordinate singularities and use it to classify the phase space as the three circulations vary.
Small-Mass Asymptotics of Massive Point Vortex Dynamics in Bose--Einstein Condensates I: Averaging and Normal Forms
Tomoki Ohsawa, Andrea Richaud, and Roy Goodman. arXiv preprint arXiv:2503.19222, 2026.
We perform an asymptotic analysis of massive point-vortex dynamics in Bose–Einstein condensates in the small-mass limit \(\varepsilon \to 0\). We define two distinguished manifolds in the phase space of the …
QGLAB: A MATLAB Package for Computations on Quantum Graphs
Roy Goodman, Gracie Conte, and Jeremy Marzuola. SIAM Journal on Scientific Computing, 2025.
We describe QGLAB, a new MATLAB package for analyzing partial differential equations on quantum graphs. The supplementary material contains additional examples and a complete listing of user-callable functions.
A new canonical reduction of three-vortex motion and its application to vortex-dipole scattering
Atul Anurag (अतुल अनुराग), Roy Goodman, and Ellison O'Grady. Physics of Fluids, 2024.
We use Jacobi coordinates and Nambu brackets to derive a new representation of the motion of three vortices which, unlike all previous reductions, introduces no singularities into the system. We use this to study the scattering of dipoles by stationary vortices.
An English Translation of Gröbli's Ph.D. Dissertation: "Specielle Probleme über die Bewegung geradliniger paralleler Wirbelfäden"
Roy Goodman. arXiv preprint arXiv:2404.01305, 2024.
A complete English translation of Walter Gröbli’s 1877 Ph.D. Thesis, together with some notes on the process. The work considers the dynamics of point vortices in a two-dimensional inviscid incompressible fluid and derives a number of exact solutions in the cases of three, four and \(2n\) vortices with certain restriction on the vortices’ circulation and the symmetry of the initial configuration.
Efficient Manipulation of Bose-Einstein Condensates in a Double-Well Potential
Jimmie Adriazola, Roy Goodman, and Panos Kevrekidis. Communications in Nonlinear Science and Numerical Simulation, 2023.
We use optimal control based on a Galerkin-truncated model to transfer a BEC from one well of a two-well potential to the other.
Apodizer Design to Efficiently Couple Light into a Fiber Bragg Grating
Jimmie Adriazola and Roy Goodman. SIAM Journal on Applied Mathematics, 2023.
We use an optimal control framework to efficiently couple light into a fiber Bragg grating, improving a previously-reported 66 percent transmission to 88 percent.
Transition to instability of the leapfrogging vortex quartet
Roy Goodman and Brandon Behring. Mechanics Research Communications, 2023.
We show via analytical perturbation theory that the leapfrogging vortex quartet becomes unstable exactly at the critical ratio \(\alpha= \phi^{-2}.\)
An Optimal Control Approach to Gradient-Index Design for Beam Reshaping
Jimmie Adriazola and Roy Goodman. Journal of the Optical Society of America A, 2022.
We address the problem of reshaping light in the Schrödinger optics regime from the perspective of optimal control theory. In technological applications, Schrödinger optics is often used to model a …
A Reduction-Based Strategy for Optimal Control of Bose-Einstein Condensates
Jimmie Adriazola and Roy Goodman. Physical Review E, 2022.
Applications of Bose-Einstein Condensates (BEC) often require that the condensate be prepared in a specific complex state. Optimal control is a reliable framework to prepare such a state while avoiding …
Solitary Waves in Mass-in-Mass Lattices
Timothy Faver, Roy Goodman, and Doug Wright. Zeitschrift für angewandte Mathematik und Physik, 2020.
We consider the existence of spatially localized traveling wave solutions of the mass-in-mass lattice. Under an anti-resonance condition first discovered by Kevrekidis, Stefanov and Xu, we prove that such solutions …
Loss of Physical Reversibility in Reversible Systems
Amir Sagiv, Adi Ditkowski, Roy Goodman, and Gadi Fibich. Physica D: Nonlinear Phenomena, 2020.
A dynamical system is said to be reversible if, given an output, the input can always be recovered in a well-posed manner. Nevertheless, we argue that reversible systems that have …
Stability of Leapfrogging Vortex Pairs: A Semi-analytic Approach
Brandon Behring and Roy Goodman. Physical Review Fluids, 2019.
We investigate the stability of a one-parameter family of periodic solutions of the four-vortex problem known as leapfrogging orbits. These solutions, which consists of two pairs of identical yet oppositely-signed …
Drift of spectrally stable shifted states on star graphs
Adilbek Kairzhan, Dmitry Pelinovsky, and Roy Goodman. SIAM Journal on Applied Dynamical Systems, 2019.
When the coefficients of the cubic terms match the coefficients in the boundary conditions at a vertex of a star graph and satisfy a certain constraint, the nonlinear Schrödinger (NLS) …
Topological features determining the error in the inference of networks using transfer entropy
Roy Goodman and Maurizio Porfiri. Mathematics in Engineering, 2019.
The problem of inferring interactions from observations of individual behavior in networked dynamical systems is ubiquitous in science and engineering. From brain circuits to financial networks, there is a dire …
Mathematical Analysis of Fractal Kink-Antikink Collisions in the $\varphi^4$ Model
Roy Goodman. A Dynamical Perspective on the \(\varphi^4\) Model, Nonlinear Systems and Complexity 26 (Springer), 2019.
We analyze the fractal structure seen in kink-antikink collisions of the \(\varphi^4\) equation. The analysis is based on qualitative ordinary differential equation models related to those obtained using the variational …
NLS bifurcations on the bowtie combinatorial graph and the dumbbell metric graph
Roy Goodman. Discrete and Continuous Dynamical Systems A, 2019.
We consider the bifurcations of standing wave solutions to the nonlinear Schrödinger equation (NLS) posed on a quantum graph consisting of two loops connected by a single edge, the so-called …
Bifurcations of relative periodic orbits in NLS/GP with a triple-well potential
Roy Goodman. Physica D: Nonlinear Phenomena, 2017.
The nonlinear Schrödinger/Gross–Pitaevskii (NLS/GP) equation is considered in the presence of three equally-spaced potentials. The problem is reduced to a finite-dimensional Hamiltonian system by a Galerkin truncation. Families of oscillatory …
A Mechanical Analog of the Two-Bounce Resonance of Solitary Waves: Modeling and Experiment
Roy Goodman, Amin Rahman, Michael Bellanich, and Catherine Morrison. Chaos: An Interdisciplinary Journal of Nonlinear Science, 2015.
We describe a simple mechanical system, a ball rolling along a specially-designed landscape, that mimics the dynamics of a well known phenomenon, the two-bounce resonance of solitary wave collisions, that …
Dynamics of vortex dipoles in anisotropic Bose-Einstein condensates
Roy Goodman, Panos Kevrekidis, and Ricardo Carretero González. SIAM Journal on Applied Dynamical Systems, 2015.
We study the motion of a vortex dipole in a Bose-Einstein condensate confined to an anisotropic trap. We focus on a system of ordinary differential equations describing the vortices’ motion, …
Self-trapping and Josephson tunneling solutions to the nonlinear Schrödinger / Gross-Pitaevskii Equation
Roy Goodman, Jeremy Marzuola, and Michael Weinstein. Discrete and Continuous Dynamical Systems A, 2015.
We study the long-time behavior of solutions to the nonlinear Schrödinger / Gross-Pitaevskii equation (NLS/GP) with a symmetric double-well potential. NLS/GP governs nearly-monochromatic guided optical beams in weakly coupled waveguides …
High-order Adaptive Method for Computing Two-dimensional Invariant Manifolds of Maps
Jacek Wróbel and Roy Goodman. Communications in Nonlinear Science and Numerical Simulation, 2013.
An efficient and accurate numerical method is presented for computing invariant manifolds of maps which arise in the study of dynamical systems. A quasi-interpolation method due to Hering-Bertram et al. …
Hamiltonian Hopf bifurcations and dynamics of NLS/GP standing-wave modes
Roy Goodman. Journal of Physics A: Mathematical and Theoretical, 2011.
We examine the dynamics of solutions to nonlinear Schrödinger/Gross– Pitaevskii equations that arise due to semisimple indefinite Hamiltonian Hopf bifurcations—the collision of pairs of eigenvalues on the imaginary axis. We …
High-Order Bisection Method for Computing Invariant Manifolds of Two-Dimensional Maps
Roy Goodman and Jacek Wróbel. International Journal of Bifurcation and Chaos, 2011.
We describe an efficient and accurate numerical method for computing smooth approximations to invariant manifolds of planar maps, based on geometric modeling ideas from Computer Aided Geometric Design (CAGD). The …
Nonlinear hydrodynamic phenomena in Stokes flow regime
Jerzy Bławzdziewicz, Roy Goodman, N. Khurana, E. Wajnryb, and Yuan-Nan Young. Physica D: Nonlinear Phenomena, 2010.
We investigate nonlinear phenomena in dispersed two-phase systems under creeping-flow conditions. We consider nonlinear evolution of a single deformed drop and collective dynamics of arrays of hydrodynamically coupled particles. To …
Chaotic scattering in solitary wave interactions: A singular iterated-map description
Roy Goodman. Chaos: An Interdisciplinary Journal of Nonlinear Science, 2008.
We derive a family of singular iterated maps—closely related to Poincaré maps—that describe chaotic interactions between colliding solitary waves. The chaotic behavior of such solitary-wave collisions depends on the transfer …
Hysteretic and chaotic dynamics of viscous drops in creeping flows with rotation
Yuan-Nan Young, Jerzy Bławzdziewicz, Vittorio Cristini, and Roy Goodman. Journal of Fluid Mechanics, 2008.
We investigate nonlinear phenomena in dispersed two-phase systems under creeping-flow conditions. We consider nonlinear evolution of a single deformed drop and collective dynamics of arrays of hydrodynamically coupled particles. To …
Stability and instability of nonlinear defect states in the coupled mode equations---analytical and numerical study
Roy Goodman and Michael Weinstein. Physica D: Nonlinear Phenomena, 2008.
Coupled backward and forward wave amplitudes of an electromagnetic field propagating in a periodic and nonlinear medium at Bragg resonance are governed by the nonlinear coupled mode equations (NLCME). This …
Chaotic Scattering and the $n$-bounce Resonance in Solitary Wave Interactions
Roy Goodman and Richard Haberman. Physical Review Letters, 2007.
We present a new and complete analysis of the n-bounce resonance and chaotic scattering in solitary wave collisions. In these phenomena, the speed at which a wave exits a collision …
Kink-antikink collisions in the $\phi^4$ equation: The $n$-bounce resonance and the separatrix map
Roy Goodman and Richard Haberman. SIAM Journal on Applied Dynamical Systems, 2005.
We provide a detailed mathematical explanation of a phenomenon known as the two-bounce resonance observed in collisions between kink and anti-kink traveling waves of the phi-four equations of mathematical physics. …
Trapping light with grating defects
Roy Goodman, Richart Slusher, Michael Weinstein, and Martin Klaus. Mathematical Studies in Nonlinear Wave Propagation, Contemporary Mathematics 379, 2005.
Gap solitons are localized traveling waves that exist in Bragg grating optical fibers. We demonstrate a family of grating defects that support linear and nonlinear standing wave modes, and show …
Vector soliton interactions in birefringent optical fibers
Roy Goodman and Richard Haberman. Physical Review E, 2005.
We consider the interactions of two identical, orthogonally polarized vector solitons in a nonlinear optical fiber with two polarization directions, described by a coupled pair of nonlinear Schrödinger equations. We …
Interaction of sine-Gordon kinks with defects: The two-bounce resonance
Roy Goodman and Richard Haberman. Physica D: Nonlinear Phenomena, 2004.
A model of soliton–defect interactions in the sine-Gordon equations is studied using singular perturbation theory. Melnikov theory is used to derive a critical velocity for strong interactions, which is shown …
Strong NLS soliton--defect interactions
Roy Goodman, Philip Holmes, and Michael Weinstein. Physica D: Nonlinear Phenomena, 2004.
We consider the interaction of a nonlinear Schrödinger soliton with a spatially localized (point) defect in the medium through which it travels. Using numerical simulations, we find parameter regimes under …
Interaction of sine-Gordon kinks with defects: phase space transport in a two-mode model
Roy Goodman, Philip Holmes, and Michael Weinstein. Physica D: Nonlinear Phenomena, 2002.
We study a model derived by Fei et al. [Phys. Rev. A 45 (1992) 6019] of a kink solution to the sine-Gordon equation interacting with an impurity mode. The model …
Modulations in the leading edges of midlatitude storm tracks
Roy Goodman, Andrew Majda, and David McLaughlin. SIAM Journal on Applied Mathematics, 2002.
Downstream development is a term encompassing a variety of effects relating to the propagation of storm systems at midlatitude. We investigate a mechanism behind downstream development and study how wave …
Stopping Light on a Defect
Roy Goodman, Richart Slusher, and Michael Weinstein. Journal of the Optical Society of America B, 2002.
Gap solitons are localized nonlinear coherent states that have been shown both theoretically and experimentally to propagate in periodic structures. Although theory allows for their propagation at any speed v, …
Trapping of kinks and solitons by defects: phase space transport in finite-dimensional models
Philip Holmes, Roy Goodman, and Michael Weinstein. Progress in Nonlinear Science, Vol. 1 (Nizhny Novgorod, 2001), 2002.
We study models of Fei et al. and of Forinash et al of kinks in the sine-Gordon equation, and solitons in the nonlinear Schrodinger equation interacting with point defects. The …
Nonlinear propagation of light in one-dimensional periodic structures
Roy Goodman, Michael Weinstein, and Philip Holmes. Journal of Nonlinear Science, 2001.
We consider the nonlinear propagation of light in an optical fiber waveguide as modeled by the anharmonic Maxwell-Lorentz equations (AMLE). The waveguide is assumed to have an index of refraction …
Trigger Waves in a Model for Catalysis
Roy Goodman, David Graff, Leonard Sander, Patrick Leroux-Hugon, and Eric Clement. Physical Review E, 1995.
We consider the model of catalysis due to Ziff, Gulari, and Barshad [Phys Rev. Lett. 56, 2553 (1986)] as a pattern formation problem. We find that the model supports …